Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: MWG808

[Submit comment/correction]

Locus	MWG808
Type	RFLP
Synonym	Synonym MWG808
Chromosome	7H
Chromosome Arm	7HL
Map	Barley-Consensus-7H 0 [ Show all 16 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 17 ]
Species	Hordeum vulgare
Probe	MWG808
Reference	Szucs P et al. (2009) An Integrated Resource for Barley Linkage Map and Malting Quality QTL Alignment The Plant Genome 2:134-140. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Kleinhofs, Andris
Remark	Number of populations contributing to the placement of MWG808 in the Barley, Consensus 2006 DArT maps = 1 This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec; Igri x Franka
Possible Orthologs	MWG808-7H Xmwg808
Probe	MWG808
Locus	MWG808 [ Show all 6 ]
Synonym	Synonym HAR35_27299 HAR35_42033
Type	Genomic STS
STS primers	5' TCGCCCAGAGACATAAAGC 5' ACACCCAAATTGACGTTGC
STS size	233
Amplification Conditions	STS annealing temperature 58-60 oC
Sequence	AJ234566 AJ234565 MWG808-5 MWG808-3
Linkage Group	?
Insert Enzyme	PstI
Source Species	Hordeum vulgare
Insert Size	1.5