Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Mad2

[Submit comment/correction]

Locus	Mad2
Type	RFLP
Chromosome	5H
Map	Barley-ConsensusFHB-5H 11.4 [ Show all 7 ]
	[ Show Nearby Loci ]
Map Data	Barley, Consensus 2006, DArT [ Show all 7 ]
Species	Hordeum vulgare
Probe	pJS18-2
Reference	Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091. Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184.
Remark	Number of populations contributing to the placement of Mad2 in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Probe for Locus	pJS18-2
Locus	Mad1 Mad2 JS018B JS018A
General Remarks	Subclone of lambda-18 (MADS box), from screening a barley phage library with a rice agamous clone. agamous, Hordeum vulgare equivalent Hordeum vulgare phage library screened with KFP141 and pulled 2 clones. This is one of them. This plasmid is a subclone of the larger phage DNA.
Type	Genomic
Linkage Group	Barley 1 (7H)
Source Species	Hordeum vulgare
Insert Size	0.6