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GrainGenes Marker Report: Pub (Hordeum)

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Gene	Pub (Hordeum)
Full Name	Pubescent leaf blade
Gene Class	Pubescent leaf
Allele	Pub (Hordeum) pub (Hordeum)
Locus	ABG389 mPub Pub
Reference	Kleinhofs A and Kilian A (1994) DNA based markers in plants. 1.
Chromosome	3H
Image	Barley, pub (hairless) phenotype Barley, Pub (pubescent) phenotype
Info Source	von Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Locus Associated with Gene	ABG389
Type	RFLP
Synonym	Synonym Pub (Hordeum)
Chromosome	3H
Chromosome Arm	3HL
Map	Barley-Consensus-3H 62.5 [ Show all 12 ]
	[ Show Nearby Loci ]
Map Data	Barley consensus [ Show all 12 ]
Probe	ABG389
Associated Gene	Pub (Hordeum)
Gene Class	Pubescent leaf
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527. Kleinhofs A et al. (1993) A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome Theoretical and Applied Genetics 86:705-712.
Data Source	Blake, Tom 05.04.19
Remark	Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Igri x Franka
Possible Orthologs	Xabg389-3
Locus Associated with Gene	mPub
Type	Gene
Chromosome	3H
Chromosome Arm	3HL
Map	Barley-Consensus-3H 64.1 [ Show all 11 ]
	[ Show Nearby Loci ]
In QTL	QABA.StMo-3H
Map Data	Barley consensus [ Show all 11 ]
Probe	Mapped_by_function
Associated Gene	Pub (Hordeum)
Gene Class	Pubescent leaf
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206. Rodriguez M et al. (2006) Integration of retrotransposons-based markers in a linkage map of barley. Molecular Breeding 17:173-184. Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Data Source	Blake, Tom 05.04.19
Remark	Number of populations contributing to the placement of mPub in the Barley, Consensus 2006 DArT maps = 1 Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Steptoe x Morex,Oregon Wolfe Barleys Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Steptoe x Morex; Oregon Wolfe Dom x Rec
Locus Associated with Gene	Pub
Type	Gene
Synonym	Synonym Pub (Hordeum)
Chromosome	3H
Map	Hordeum-Consensus2005-SNP-3H 133.198 [ Show all 7 ]
	[ Show Nearby Loci ]
Map Data	Barley genes 2 [ Show all 7 ]
Associated Gene	Pub (Hordeum)
Gene Class	Pubescent leaf
Reference	Rostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
Locus	Pub (Hordeum)
Synonym	Synonym ABG389 Pub

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