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GrainGenes Marker Report: Vrn1

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Gene
Vrn1 (Triticum)
Synonym
Other nameVrn-A1 (Triticum)
SynonymAP1 (Triticum)
Gene Class
Response to vernalization (Triticum)
Allele
Vrn1 (Triticum)
vrn1 (Triticum)
Locus
vrn-A1-5A
Vrn1
Candidate Locus
AP1
Reference
ReferenceSantra DK et al. (2009) Genetic and Molecular Characterization of Vernalization Genes Vrn-A1, Vrn-B1, and Vrn-D1 in Spring Wheat Germplasm from the Pacific Northwest Region of the U.S.A. Plant Breeding 128:576-584.
[ Show all 8 ]
URL
Vrn-1 gene at Komugi: Catalogue of Gene Symbols for Wheat
Gene Product
AP1
MADS box transcription factor
MADS-box transcriptional factor VRN1
VRN1
Chromosome Arm
5AL
ReferenceLaw CN et al. (1976) The genetic control of ear emergence time by chromosomes 5A and 5D of wheat. Heredity 36:49-58.
Germplasm
Hexaploid stockBorsum
ReferencePBA-14-42 Plant Breeding Abstracts 14:42.
[ Show all 28 ]
Comment
Kuspira et al. (1986) attributed single gene variation in T. monococcum to the Vrn1/vrn1 locus. Multiple recessive alleles were suggested.
The Vrn-1 gene encodes a MADS-box transcription factor closely related to the Arabidopsis AP1/FRUITFULL family, responsible for the transition of the shoot apical meristem from the vegetative to reproductive stage in wheat (Yan et al., 2003).
Deletions in the promoter (Vrn-A1a, Vrn-A1b) (Yan, Helguera, et al., 2004), or the first intron of this gene (Vrn-A1c, Vrn-B1a, Vrn-D1a) (Fu et al., 2005) are the most common sources of spring growth habit among landraces and commercial cultivars of polyploid wheat worldwide (Zhang et al., 2008; Santra et al., 2009; Iqbal et al., 2007).
Clone
AY244508/9
Sequence
DQ291016
[ Show all 275 ]
2 Point Data
Vrn1/AP1
Vrn1/Xbcd450
Data Source
Dubcovsky, Jorge2003.04
Data Curator
Cooper, LaurelOct-2020
Hart, Gary E.96.03.24



Locus Associated with Gene
vrn-A1-5A
Synonym
Other nameVrn-A1
Vrn1
Map
CS/SQ1-5A117
[ Show Nearby Loci ]
In QTL
QYld.saq-5A
Map Data
Wheat, Chinese Spring x SQ1
Associated Gene
Vrn1 (Triticum)
Gene Class
Response to vernalization (Triticum)



Locus Candidate for Gene
AP1
Type
CAPS
Chromosome
5A
Chromosome Arm
5AL
Map
5AL, Vrn1 region0
[ Show Nearby Loci ]
Map Data
5AL, Vrn1 region
2 Point Data
Vrn1/AP1
Species
Triticum monococcum
Probe
AY244508/9
Candidate Gene
Vrn1 (Triticum)
Reference
ReferenceYan L et al. (2003) Positional cloning of the wheat vernalization gene VRN1 Proceedings of the National Academy of Sciences, USA 100:6263-6268.
Data Source
Dubcovsky, Jorge2003.04



Locus
Vrn1
Type
Gene
Synonym
Other nameVrn-A1
vrn-A1-5A
Chromosome
5A
Chromosome Arm
5AL
Map
5AL, Vrn1 region0
Ta-Synthetic/Opata-5A81.9
Triticum-Genes-5A9.4
Wheat-Composite2004-5A66
[ Show Nearby Loci ]
Map Data
5AL, Vrn1 region
Wheat genes
Wheat, Composite, 2004
Wheat, Synthetic x Opata  [ GBrowser ]
2 Point Data
Centromere/Vrn1#1
[ Show all 6 ]
Species
Triticum monococcum
Associated Gene
Vrn1 (Triticum)
Gene Class
Response to vernalization (Triticum)
Reference
ReferenceYan L et al. (2003) Positional cloning of the wheat vernalization gene VRN1 Proceedings of the National Academy of Sciences, USA 100:6263-6268.
ReferenceLaw CN et al. (1976) The genetic control of ear emergence time by chromosomes 5A and 5D of wheat. Heredity 36:49-58.
Data Source
Dubcovsky, Jorge2003.04

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