Query (optional)   in Class  

GrainGenes Marker Report: WMC471

[Submit comment/correction]

Locus
wmc471
Type
Microsatellite
Map
Durum Wheat, NSGC Lr 4B76.8
[ Show all 7 ]
[ Show Nearby Loci ]
Map Data
3B Physical
Durum Wheat, NSGC Lr
Wheat, Finch x Eltan
Wheat, Yr genes and QTL
Wheat_Consensus_2014_Ug99_Rust
Probe
WMC471
Possible Orthologs
Xwmc471
[ Show all 7 ]



Probe
WMC471
Locus
Xwmc471
[ Show all 8 ]
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 25e1
Donor: Jizeng, Beijing
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 161 bases located on 4A
Trimmed to insert at 5' end and to Ssp1 at 3' end. (GT)4 112 to 119, (GT)8 179 to 194, (GT)14 197 to 224.
Type
PCR
SSR
PCR primers
Forward ggcAATAATAgTgcAAggAATg at 45 length 22 bases, Tm 60
Reverse gccgATAATgggcAATATAAgT at 235 length 22 bases, Tm 61
SSR size
212 bases expected, Chinese Spring
Amplification Conditions
tested 61C anneal, no product. 51C anneal, polymorphic on acrylamide.
Sequence
WMC471
Source Species
Triticum aestivum