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GrainGenes Marker Report: WMC544

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Probe
WMC544
Locus
Xwmc544-3B
wmc544
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 10d5
Donor: Gale, John Innes
No trimming done to sequence at Agrogene, ends not located. Bases 143 to 163 (complement) show homology to 17e12 bases 355 to 375 (21 in longest run, maxScore = 55). Forward and reverse primers no obvious match to 17e12. (CA)14 104 to 131, (CA)10 238 to 257.
Type
PCR
SSR
PCR primers
Forward ccATTTgAggTTTggTcgcTAc at 65 length 22 bases, Tm 64
Reverse TATATgTgATTTgTcgTgcccc at 425 length 22 bases, Tm 63
SSR size
382 bases expected, Chinese Spring
Amplification Conditions
61C anneal, polymorphic on acrylamide.
Sequence
WMC544
Source Species
Triticum aestivum