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GrainGenes Marker Report: Xbarc110-5D

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Locus
Xbarc110-5D
Type
Microsatellite
Chromosome
5D
Map
Chinese_Spring_Deletion_SSR_5D0.3
Conan/Reeder-5D187.625
Ta-Synthetic/Opata-BARC-5D140.4
[ Show Nearby Loci ]
Breakpoint Interval
C-5DL1-0.60
Map Data
Wheat, Conan x Reeder
Wheat, Physical, SSR
Wheat, Synthetic x Opata, BARC
Probe
BARC110
Possible Orthologs
Xbarc110
barc110



Probe for Locus
BARC110
Locus
Xbarc110-5D
Xbarc110
barc110
General Remarks
Contains motif : (ATT)28
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' CCCGAACAATGGCTTTGGTGTCGTAAT 3'
5' CATGGTGACGGCAAGTGTGAGGT 3'
Amplification Conditions
Annealing temperature = 50
Sequence
BV211405
Source Species
Triticum aestivum