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GrainGenes Marker Report: Xbarc135

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Locus
Xbarc135
Type
Microsatellite
Chromosome
5A
Map
Wheat, UC1110 x PI610750 7D39.7
Wheat-Composite2004-5A3
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Wheat, UC1110 x PI610750
Probe
BARC135
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xbarc135-3D
[ Show all 6 ]



Probe for Locus
BARC135
Locus
Xbarc135-4A
[ Show all 8 ]
General Remarks
Contains motif : (CT)19
SSR size is the band size in Chinese Spring
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' ATC GCC ATC TCC TCT ACC A 3'
5' GCG AAC CCA TGT GCT AAG T 3'
SSR size
239
Amplification Conditions
Annealing temperature = 52
Sequence
BV211431
Source Species
Triticum aestivum