GrainGenes Marker Report: Xbarc135-3D
Locus
Xbarc135-3D
Type
Microsatellite
Chromosome
3D
Map
Chinese_Spring_Deletion_SSR_3D -0.775 Ta-Synthetic/Opata-BARC-3D 2
[ Show Nearby Loci ]
Breakpoint Interval
3DS6-0.55-1.00
Map Data
Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC
Probe
BARC135
Data Source
Shi, JianRong 2005.07
Remark
Xbarc135 has been previously published as being on 5A, e.g. in GrainGenes Image 'Wheat, Synthetic x Opata, BARC markers, 5A'. The correction is from JianRong Shi.
Possible Orthologs
Xbarc135
[ Show all 6 ]
Probe for Locus
BARC135
Locus
Xbarc135-4A
[ Show all 8 ]
General Remarks
Contains motif : (CT)19 SSR size is the band size in Chinese Spring BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' ATC GCC ATC TCC TCT ACC A 3'
5' GCG AAC CCA TGT GCT AAG T 3'
SSR size
239
Amplification Conditions
Annealing temperature = 52
Sequence
BV211431
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc135-3D
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