Query (optional)   in Class  

GrainGenes Marker Report: Xbarc139-3B

[Submit comment/correction]

Locus
Xbarc139-3B
Type
Microsatellite
Chromosome
3B
Chromosome Arm
3BS
Map
Chinese_Spring_Deletion_SSR_3B-0.165
P91193D1/P92201D5-3B86.7
Triticum-NxB-FHB-QTL/2003-3BS78
[ Show Nearby Loci ]
Breakpoint Interval
C-3BS1-0.33
Map Data
Wheat, NxB, FHB QTL
Wheat, P91193D1 x P92201D5
Wheat, Physical, SSR
Probe
BARC139
Reference
ReferenceLiu SX and Anderson JA (2003) Marker assisted evaluation of Fusarium head blight resistant wheat germplasm Crop Science 43:760-766.
Possible Orthologs
barc139
Xbarc139
XbarcM139-2B



Probe for Locus
BARC139
Locus
Xbarc139-3B
Xbarc139
XbarcM139-2B
barc139
General Remarks
Contains motif : (CA)10
SSR size is the band size in Chinese Spring
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' AGA AGC TCC CCT AAA CTG AG 3'
5' CGA CGC TGA TGA ATG AAT 3'
SSR size
215
Amplification Conditions
Annealing temperature = 50
Sequence
BV211305
Source Species
Triticum aestivum