GrainGenes Marker Report: Xbarc140-5B
Locus
Xbarc140-5B
Type
Microsatellite
Chromosome
5B
Map
Chinese_Spring_Deletion_SSR_5B 0.65 CS/SQ1-5B 150.5 Ta-SSR-2004-5B 127.2 Ta-Synthetic/Opata-BARC-5B 100.4
[ Show Nearby Loci ]
Breakpoint Interval
5BL1-0.55-0.75
Map Data
Wheat, Chinese Spring x SQ1 Wheat, Consensus SSR, 2004 Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC
Probe
BARC140
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc140
[ Show all 6 ]
Probe for Locus
BARC140
Locus
Xbarc140-5B
[ Show all 7 ]
General Remarks
Contains motif : (CT)12 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' CGCCAACACCTACCATT 3'
5' TTCTCCGCACTCACAAAC 3'
Amplification Conditions
Annealing temperature = 52
Sequence
BV211329
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc140-5B
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