Query (optional)   in Class  

GrainGenes Marker Report: Xbarc154-7A

[Submit comment/correction]

Locus
Xbarc154-7A
Type
Microsatellite
Chromosome
7A
Map
T.b.xT.m.-7A103.7
Ta-SSR-2004-7A40.6
Wheat, UC1110 x PI610750 7A71.6
[ Show Nearby Loci ]
Map Data
T. boeoticum x monococcum
Wheat, Consensus SSR, 2004
Wheat, UC1110 x PI610750
Probe
BARC154
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc154
Xbarc154-7D
barc154
barc154-7A
barc154-7D



Probe for Locus
BARC154
Locus
Xbarc154-7D
[ Show all 6 ]
General Remarks
Contains motif : (CT)16
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' GTAATTCCGGTTCCACTTGACATT 3'
5' GGATGGGCAGCTTCAAGGTATGTT 3'
Amplification Conditions
Annealing temperature = 50
Sequence
BV211306
Source Species
Triticum aestivum