Query (optional)   in Class  

GrainGenes Marker Report: Xbarc171-6A

[Submit comment/correction]

Locus
Xbarc171-6A
Type
Microsatellite
Chromosome
6A
Map
Chinese_Spring_Deletion_SSR_6A0.95
CS/SQ1-6A121.6
Ta-Synthetic/Opata-BARC-6A58
[ Show Nearby Loci ]
Breakpoint Interval
6AL8-0.90-1.00
Map Data
Durum wheat, Svevo x Ciccio
Wheat, Chinese Spring x SQ1
Wheat, Physical, SSR
Wheat, Synthetic x Opata, BARC
Probe
BARC171
Possible Orthologs
Xbarc171
XbarcM171-3A
barc171
barc171-6A



Probe for Locus
BARC171
Locus
Xbarc171-6A
Xbarc171
XbarcM171-3A
barc171
barc171-6A
General Remarks
Contains motif : (ATT)27
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' GCGGGGTCATCTTAGTAACTCAAATA 3'
5' ACTGTCAACGTTGGTTCACATTCA 3'
Amplification Conditions
Annealing temperature = 50
Sequence
BV211530
Source Species
Triticum aestivum