GrainGenes Marker Report: Xbarc186-5A
Locus
Xbarc186-5A
Type
Microsatellite
Chromosome
5A
Map
Chinese_Spring_Deletion_SSR_5A 0.175 T.b.xT.m.-5A 18.1 Ta-SSR-2004-5A 59.1 Ta-Synthetic/Opata-BARC-5A 16.5
[ Show Nearby Loci ]
Breakpoint Interval
C-5AL12-0.35 5AL17-0.78-0.87
Map Data
T. boeoticum x monococcum Wheat, Consensus SSR, 2004 Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC
Probe
BARC186
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc186
[ Show all 10 ]
Probe for Locus
BARC186
Locus
Xbarc186-5A
[ Show all 11 ]
General Remarks
Contains motif : (CT)15+4 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' GGAGTGTCGAGATGATGTGGAAAC 3'
5' CGCAGACGTCAGCAGCTCGAGAGG 3'
Amplification Conditions
Annealing temperature = 58
Sequence
BV211828
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc186-5A
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