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GrainGenes Marker Report: Xbarc327

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Locus
Xbarc327
Type
Microsatellite
Chromosome
4A
Map
Wheat, UC1110 x PI610750 4A128.8
Wheat, WH542 x Synthetic 4A23.3
Wheat-Composite2004-4A152
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Wheat, UC1110 x PI610750
Wheat, WH542 x Synthetic
Probe
BARC327
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xbarc327-4A
barc327
barc327-4A



Probe for Locus
BARC327
Locus
Xbarc327-4A
Xbarc327
barc327
barc327-4A
General Remarks
Contains motif : (TAGA)11(CCAT)4
SSR size is the band size in Chinese Spring
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' GCG GTA TAG GTA TAT CGA GGC ATA GA 3'
5' GCG AGA GAG CGG TAG AGA TAA ATG 3'
SSR size
248
Amplification Conditions
Annealing temperature = 52
Sequence
BV211667
Source Species
Triticum aestivum