Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Xbarc52-4A

[Submit comment/correction]

Locus	Xbarc52-4A
Type	Microsatellite
Chromosome	4A
Map	Chinese_Spring_Deletion_SSR_4A 0.9 Kofa/UC1113-4A 128.6 Ta-Synthetic/Opata-BARC-4A 96.9
	[ Show Nearby Loci ]
Breakpoint Interval	4AL4-0.80-1.00
Map Data	Durum wheat, Kofa x UC1113 Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC
Probe	BARC52
Possible Orthologs	Xbarc52 Xbarc52-3D barc52 barc52-4A
Probe for Locus	BARC52
Locus	Xbarc52-4A Xbarc52 Xbarc52-3D barc52 barc52-4A
General Remarks	Contains motif : (ATCT)5 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type	PCR SSR
PCR primers	5' GCGCCATCCATCAACCGTCATCGTCATA 3' 5' GCGAGGAAGGCGGCCACCAGAATGA 3'
Amplification Conditions	Annealing temperature = 60
Sequence	BV211848
Source Species	Triticum aestivum