GrainGenes Marker Report: Xbarc59-5B
Locus
Xbarc59-5B
Type
Microsatellite
Chromosome
5B
Map
Chinese_Spring_Deletion_SSR_5B 0.65 Louise/Penawawa-5B 145.2 Ta-SSR-2004-5B 153.9 Ta-Synthetic/Opata-BARC-5B 121.7
[ Show Nearby Loci ]
Breakpoint Interval
5BL1-0.55-0.75
Map Data
Wheat, Consensus SSR, 2004 Wheat, Louise x Penawawa Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC
Probe
BARC59
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc59 Xbarc59-2D barc59 barc59-5B barc59-2D
Probe for Locus
BARC59
Locus
Xbarc59-5B
[ Show all 6 ]
General Remarks
Contains motif : (TAGA)11 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' GCGTTGGCTAATCATCGTTCCTTC 3'
5' AGCACCCTACCCAGCGTCAGTCAAT 3'
Amplification Conditions
Annealing temperature = 55
Sequence
BV211790
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc59-5B
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