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GrainGenes Marker Report: Xbarc6

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Locus
Xbarc6
Type
Microsatellite
Chromosome
3D
Map
Wheat, UC1110 x PI610750 3D30.1
Wheat-Composite2004-3D67
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Wheat, UC1110 x PI610750
Probe
BARC6
Reference
ReferenceLowe I et al. (2011) Mapping and validation of QTL which confer partial resistance to broadly virulent post-2000 North American races of stripe rust in hexaploid wheat Theoretical and Applied Genetics 123:143-157.
Possible Orthologs
Xbarc6-3D
barc6



Probe for Locus
BARC6
Locus
Xbarc6-3D
Xbarc6
barc6
General Remarks
Contains motif : (TTA)24
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' TTCGGTCGTTGAGGTGACCAATTATG 3'
5' GACAAAGGATTAGCCCAAAGTAAGAG 3'
Amplification Conditions
Annealing temperature = 52
Sequence
BV211347
Source Species
Triticum aestivum