GrainGenes Marker Report: Xbarc60-4B
Locus
Xbarc60-4B
Type
Microsatellite
Chromosome
4B
Map
Chinese_Spring_Deletion_SSR_4B 0.355 CS/SQ1-4B 117.6 Ta-SSR-2004-4B 42.8 Ta-Synthetic/Opata-BARC-4B 38.1
[ Show Nearby Loci ]
Breakpoint Interval
C-4BL5-0.71
Map Data
Wheat, Chinese Spring x SQ1 Wheat, Consensus SSR, 2004 Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC
Probe
BARC60
Reference
Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
Xbarc60 Xbarc60-1B barc60 barc60-4B barc60-1B
Probe for Locus
BARC60
Locus
Xbarc60-4B
[ Show all 6 ]
General Remarks
Contains motif : (TAGA)6(GA)5 BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR SSR
PCR primers
5' CATGCTCACAAAACCCACAAGACT 3'
5' CTCGAAAGGCGGCACCACTA 3'
Amplification Conditions
Annealing temperature = 58
Sequence
BV211473
Source Species
Triticum aestivum
GrainGenes Marker Report: Xbarc60-4B
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