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GrainGenes Marker Report: XbarcM177-3A

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Locus
XbarcM177-3A
Type
Microsatellite
Map
Chinese_Spring_Deletion_SSR_3A0.89
[ Show Nearby Loci ]
Breakpoint Interval
3AL5-0.78-1.00
Map Data
Wheat, Physical, SSR
Probe
BARC177
Remark
'M' indicates that this probe is monomorphic in Synthetic, Opata, and Chinese Spring.
Possible Orthologs
Xbarc177
Xbarc177-5D
barc177
barc177-5D



Probe for Locus
BARC177
Locus
Xbarc177-5D
Xbarc177
XbarcM177-3A
barc177
barc177-5D
General Remarks
Contains motif : (ATT)19
SSR size is the band size in Chinese Spring
BARC primer pairs are developed by P. Cregan, Q. Song and associates at the USDA-ARS Beltsville Agriculture Research Station. Meiotic map information was developed by J.R. Shi, R. Ward and associates at Michigan State University. Deletion map information was developed by B.Gill, S. Singh and associates at Kansas State University. Funding for this research is provided by USDA-ARS in conjunction with the U.S. Wheat and Barley Scab Initiative.
Type
PCR
SSR
PCR primers
5' GCG ATC CTG TTG TTG AGC GTT TGC ATA A 3'
5' TCC CGT TTT CCC GTG TGT TAG TCT A 3'
SSR size
146
Amplification Conditions
Annealing temperature = 50
Sequence
BV211534
Source Species
Triticum aestivum