GrainGenes Marker Report: Xbcd1087
Locus
Xbcd1087
Type
RFLP
Chromosome
5D
Chromosome Arm
5DL
Map
Avena-Sorrells-E 84.4 Oat-2002-OxT-QTL_2 16 Oat-2007-OxT_2 19.2 Ta-Physical-Gill-5ABD 47 Ta-Physical-Gill-5D 2.78
[ Show Nearby Loci ]
Breakpoint Interval
5DL-3/5DL-12 5L-0.44-0.49
Map Data
Diploid Oat, Cornell2 Oat-2002-OxT-QTL Oat-2007-OxT-PcQTL Wheat, Physical
Species
Triticum aestivum
Probe
BCD1087
Homology
CAA05145.2 e-value: 8e-15 (AJ002020) proton pump interactor [Arabidopsis thaliana]
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs
bcd1087
[ Show all 6 ]
Probe for Locus
BCD1087
Locus
BCD1087a
[ Show all 7 ]
Synonym
Synonym HAR35_853 HAR35_854
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library Bar.LambZAPII [c]
Type
cDNA
Sequence
BE438650 BE438721 BE438814 BCD1087_WHE1G0101 BCD1087_WHE1G0102
Polymorphism
BCD1087 EcoRI
Linkage Group
5L
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
0.8
PCR size
0.8
GrainGenes Marker Report: Xbcd1087
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