GrainGenes Marker Report: Xcdo1049
Locus
Xcdo1049
Type
RFLP
Chromosome
5D
Chromosome Arm
5DL
Map
Avena-Sorrells-F 64.3 Ta-Physical-Gill-5ABD 31 Ta-Physical-Gill-5D 0.9 Tm-Dubcovsky2-5A 0
[ Show Nearby Loci ]
Breakpoint Interval
Cent/5DL-7 5L-0.30-0.32
Map Data
Diploid Oat, Cornell2 T. monococcum, DV92 x G3116 Wheat, Physical
Species
Triticum aestivum
Probe
CDO1049
Homology
T06979 e-value: 4e-45 polyadenylate-binding protein - wheat
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Remark
In the population 'T. monococcum, DV92 x G3116,' this locus was completely linked to Xcdo749, Xcdo677, X5SDna-5A, Xpsr326, Xwg341, Xpsr929, Xpsr628, Xpsr118, XksuH8, Xcdo1338, Xpsr360, Xwg541, Xbcd204, Xmwg645, Xabc706, and Xtam40. Segregation data are listed under Xcdo749.
Possible Orthologs
CDO1049 CDO1049a CDO1049b Xcdo1049-5A
Probe for Locus
CDO1049
Locus
Xcdo1049 CDO1049 CDO1049a CDO1049b Xcdo1049-5A
Synonym
Synonym HAR35_1056 HAR35_1351 HAR35_50596
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439198 CDO1049_WHE03C04.r1
Polymorphism
CDO1049 EcoRI
Linkage Group
5L
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.3
PCR size
1.3
GrainGenes Marker Report: Xcdo1049
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