GrainGenes Marker Report: Xcdo1199A
Locus
Xcdo1199A
Type
RFLP
Map
Oat-2001-KxO_6 71.25 Oat-KxO-6 88.9 Oat-KxO/AFLP-6-37 92 Oat-KxO/Q-6 88.9
[ Show Nearby Loci ]
QTL with Locus Marker
Height, KxO-6-d Height, KxO-6-e Straw yield, KxO-6-a
Map Data
Oat, KxO Oat, KxO, AFLP Oat, KxO/QTL Oat-2001-KxO
Probe
CDO1199
Homology
TRP1_MAIZE e-value: 3e-08 TRYPTOPHAN SYNTHASE BETA CHAIN 1 (ORANGE PERICARP 1) TRP1_MAIZE e-value: 8e-34 TRYPTOPHAN SYNTHASE BETA CHAIN 1 (ORANGE PERICARP 1)
Image
CDO1199 KO autoradiogram
Reference
Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
CDO1199
[ Show all 10 ]
Probe for Locus
CDO1199
Locus
Xcdo1199A
[ Show all 12 ]
Synonym
Synonym HAR35_1402
Reference
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type
cDNA
Sequence
BE439152 BE439220 CDO1199_WHE03C05.s1 CDO1199_WHE03C05.r1 CN180768
Polymorphism
CDO1199 EcoRI Durums CDO1199 EcoRI
Linkage Group
7L
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.2
PCR size
1.2
GrainGenes Marker Report: Xcdo1199A
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