GrainGenes Marker Report: Xcdo1319B
Locus
Xcdo1319B
Type
RFLP
Map
Oat-2001-KxO_5 7.5 Oat-KxO-5 5.8 Oat-KxO/AFLP-5-30 104 Oat-KxO/Q-5 5.8
[ Show Nearby Loci ]
QTL with Locus Marker
Test weight, KxO-5-a Test weight, KxO-5-d Test weight, KxO-5-e
Map Data
Oat, KxO Oat, KxO, AFLP Oat, KxO/QTL Oat-2001-KxO
Probe
CDO1319
Homology
BAB10259.1 e-value: 4e-19 (AB025632) contains similarity to sorting nexin~gene_id:MQJ2.4 [Arabidopsis thaliana] BAB10259.1 e-value: 1e-18 (AB025632) contains similarity to sorting nexin~gene_id:MQJ2.4 [Arabidopsis thaliana]
Image
CDO1319 KO autoradiogram
Reference
Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs
cdo1319a
[ Show all 6 ]
Probe for Locus
CDO1319
Locus
Xcdo1319A
[ Show all 7 ]
Synonym
Synonym HAR35_22873
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439302 BE439321 CDO1319_WHE05G01.s1 CDO1319_WHE05G07.s1
Polymorphism
CDO1319 EcoRV
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.1
GrainGenes Marker Report: Xcdo1319B
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