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GrainGenes Marker Report: Xcdo1335

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Locus	Xcdo1335
Type	RFLP
Chromosome	5B 5D
Chromosome Arm	5DS
Map	Avena-Sorrells-F 55.3 Oat-KxO-30 2.9 Ta-Physical-Gill-5ABD -40 Ta-Physical-Gill-5D -1.36 Wheat-Composite2004-5B 17
	[ Show Nearby Loci ]
Breakpoint Interval	5DS-1/5DS-4 5S-0.34-0.45
Map Data	Diploid Oat, Cornell2 Oat, KxO Wheat, Composite, 2004 Wheat, Physical
Species	Triticum aestivum
Probe	CDO1335
Homology	BAA97014.1 e-value: 6e-15 (AB024032) gb|AAF56406.1~gene_id:K9P8.7~strong similarity to unknown protein [Arabidopsis thaliana]
Image	CDO1335 KO autoradiogram
Reference	Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs	CDO1335 [ Show all 7 ]
Probe for Locus	CDO1335
Locus	Xcdo1335-5B [ Show all 8 ]
Synonym	Synonym HAR35_21031
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type	cDNA
Sequence	BE439176 BE439246 CDO1335_WHE03C09.r1 CDO1335_WHE03C09.s1
Polymorphism	CDO1335 EcoRI CDO1335 DraI
Linkage Group	5S
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	1.1
PCR size	1.1