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GrainGenes Marker Report: Xcdo1396

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Locus	Xcdo1396
Type	RFLP
Chromosome	1A
Chromosome Arm	1AL
Map	Oat-2001-KxO-QTL_5 28.75 [ Show all 7 ]
	[ Show Nearby Loci ]
Map Data	Oat, KxO [ Show all 7 ]
Probe	CDO1396
Homology	RS1A_ARATH e-value: 1e-11 40S RIBOSOMAL PROTEIN S15A thaliana] Arabidopsis thaliana gb|L27461. EST gb|R30315 comes from this gene. thaliana] RS1A_ARATH e-value: 1e-68 40S RIBOSOMAL PROTEIN S15A thaliana] Arabidopsis thaliana gb|L27461. EST gb|R30315 comes from this gene. thaliana]
Image	CDO1396 KO autoradiogram
Reference	Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs	CDO1396 CDO1396A CDO1396B Xcdo1396sc cdo1396
Probe for Locus	CDO1396
Locus	CDO1396 [ Show all 6 ]
Synonym	Synonym HAR35_15083 HAR35_15084
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library OatUni-ZAPXR [c]
Type	cDNA
Sequence	BE439156 BE439225 CDO1396_WHE03D06.s1 CDO1396_WHE03D06.r1
Polymorphism	CDO1396 DraI
Linkage Group	1L, 3L
Insert Enzyme	EcoRI XhoI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
Insert Size	0.8
PCR size	0.8