GrainGenes Marker Report: Xcdo20-5A
Locus
Xcdo20-5A
Type
RFLP
Chromosome
5A
Chromosome Arm
5AL
Map
Ta-Synthetic/Opata-5A 128.2 Ta-Synthetic/Opata-BARC-5A 112.7 Ta-Synthetic/Opata-DR-5A 128.2 Ta-Synthetic/Opata-GPW-5A 165.6
[ Show Nearby Loci ]
QTL with Locus Marker
Qkb.cnl-5A.1
Map Data
Wheat, Synthetic x Opata [ GBrowser ] Wheat, Synthetic x Opata, BARC Wheat, Synthetic x Opata, DR Genes Wheat, Synthetic x Opata, GPW
Probe
CDO20
Homology
AC051633_5 e-value: 1e-25 (AC051633) putative ubiquitin protein [Oryza sativa] AC051633_5 e-value: 4e-14 (AC051633) putative ubiquitin protein [Oryza sativa]
Image
CDO20 SO autoradiogram
Possible Orthologs
CDO020
[ Show all 11 ]
Probe for Locus
CDO20
Locus
Xcdo20-5A
[ Show all 12 ]
Synonym
Synonym HAR35_17893 HAR35_1872
Related Probe
CDO394 CDO1528
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439040
[ Show all 6 ]
Polymorphism
CDO20 DraI CDO20 EcoRV CDO20 EcoRI CDO20 HindIII CDO20 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.2
GrainGenes Marker Report: Xcdo20-5A
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