GrainGenes Marker Report: Xcdo457-5A
Locus
Xcdo457-5A
Type
RFLP
Chromosome
5A
Chromosome Arm
5AL
Map
5AL, CS x CS-TDIC DS5A 24.8 Ta-Synthetic/Opata-5A 115.7 Ta-Synthetic/Opata-BARC-5A 105.3 Ta-Synthetic/Opata-GPW-5A 156.4 Ta-Synthetic/Opata-SSR2-5A 172.8
[ Show Nearby Loci ]
Breakpoint Interval
5AL23-0.87-1.00
Map Data
5AL, CS x CS-TDIC DS5A Wheat, Synthetic x Opata [ GBrowser ] Wheat, Synthetic x Opata, BARC Wheat, Synthetic x Opata, GPW Wheat, Synthetic x Opata, SSR 2
Probe
CDO457
Homology
BAB09770.1 e-value: 1e-16 (AB016890) sugar transporter-like protein [Arabidopsis thaliana] BAB09770.1 e-value: 2e-23 (AB016890) sugar transporter-like protein [Arabidopsis thaliana]
Possible Orthologs
CDO457
[ Show all 14 ]
Probe for Locus
CDO457
Locus
CDO457a
[ Show all 14 ]
Synonym
Synonym HAR35_20530
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439076
[ Show all 6 ]
Polymorphism
CDO457 EcoRI CDO457 EcoRV CDO457 HindIII CDO457 XbaI
Linkage Group
[b 7L]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.4
PCR size
1.4
GrainGenes Marker Report: Xcdo457-5A
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