GrainGenes Marker Report: Xcdo53
Locus
Xcdo53
Type
RFLP
Chromosome
7D
Chromosome Arm
7DL
Map
Oat-2004-KxO-RGA_KO17 27.18 Oat-2006-KxO-RGA_KO17 10.38 Oat-KxO-17 18 Ta-Physical-Gill-7ABD 43
[ Show Nearby Loci ]
Breakpoint Interval
7L-0.40-0.45
Map Data
Oat, KxO Oat-2004-KxO-RGA Oat-2006-KxO-RGA Wheat, Physical
Species
Triticum aestivum
Probe
CDO53
Homology
T03042 e-value: 9.1 hypothetical protein 005R - Chilo iridescent virus AF370204_1 e-value: 4e-04 (AF370204) unknown protein [Arabidopsis thaliana]
Image
CDO53 KO autoradiogram
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs
CDO53 cdo53
Probe for Locus
CDO53
Locus
HD016H9 CDO53 Xcdo53 cdo53
Synonym
Synonym HAR35_9976
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439053 BE439100 CDO53_WHE2C0051 CDO53_WHE2C0052
Polymorphism
CDO53 EcoRI CDO53 EcoRV CDO53 DraI
Linkage Group
7L
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.4
PCR size
1.4
GrainGenes Marker Report: Xcdo53
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