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GrainGenes Marker Report: Xcdo549A

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Locus
Xcdo549A
Type
RFLP
Chromosome
3D
Map
Oat-2001-KxM-QTL_369
[ Show all 6 ]
[ Show Nearby Loci ]
QTL with Locus Marker
Yield, KxO-3-f
Map Data
Oat, KxO
[ Show all 6 ]
Probe
CDO549
Homology
T41528e-value: 4.1hypothetical protein SPCC645.11c - fission yeast (Schizosaccharomyces pombe)
BAA97251.1e-value: 6e-21(AB025633) gb|AAF01580.1~gene_id:MQM1.24~similar to unknown protein [Arabidopsis thaliana]
Image
CDO549 KO autoradiogram
Possible Orthologs
cdo549
[ Show all 10 ]



Probe for Locus
CDO549
Locus
Xcdo549-3A
[ Show all 16 ]
Synonym
SynonymHAR35_10419
HAR35_20508
HAR35_27511
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439171
BE439241
CDO549_WHE03A12.r1
CDO549_WHE03A12.s1
Polymorphism
CDO549 EcoRI
CDO549 EcoRV
CDO549 DraI
CDO549 HindIII
CDO549 XbaI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.2