GrainGenes Marker Report: Xcdo57
Locus
Xcdo57
Type
RFLP
Chromosome
5D 7D
Chromosome Arm
5DL 7DS
Map
Avena-Sorrells-E 99.9 Ta-Physical-Gill-5ABD 31 Ta-Physical-Gill-5D 0.9 Ta-Physical-Gill-7ABD -53
[ Show Nearby Loci ]
Breakpoint Interval
Cent/5DL-7 5L-0.30-0.32 7S-0.36-0.61
Map Data
Diploid Oat, Cornell2 Wheat, Physical
Species
Triticum aestivum
Probe
CDO57
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs
CDO057
[ Show all 29 ]
Probe for Locus
CDO57
Locus
Xcdo57-2
[ Show all 33 ]
Related Probe
BCD981
[ Show all 6 ]
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BQ548073 BQ548072 CDO57-5 CDO57-3
Polymorphism
CDO57 EcoRV CDO57 EcoRI CDO57 XbaI
Linkage Group
7L,5L [b 2S]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.6
PCR size
1.6
GrainGenes Marker Report: Xcdo57
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
| ||||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
| ||||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
| |||||||||
|
|