GrainGenes Marker Report: Xcdo99
Locus
Xcdo99
Type
RFLP
Chromosome
1B 1R
Chromosome Arm
1RS
Map
Oat-KxO-17 19.1 Secale-Devos-1R -27.5 Secale-DxR-RAPD-1R 40.1 Wheat-Composite2004-1B 18
[ Show Nearby Loci ]
Map Data
Oat, KxO Rye, Ds2 x RxL10 Rye, Ds2 x RxL10, RAPD Wheat, Composite, 2004
Probe
CDO99
Homology
BAB01753.1 e-value: 0.46 (AP000603) gb|AAD10646.1~gene_id:MRP15.12~strong similarity to unknown protein [Arabidopsis thaliana]
Image
CDO99 KO autoradiogram
Possible Orthologs
CDO099
[ Show all 11 ]
Probe for Locus
CDO99
Locus
CDO99
[ Show all 12 ]
Synonym
Synonym HAR35_2446 HAR35_47059
Related Probe
BCD98
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
BE439326
[ Show all 7 ]
Polymorphism
CDO99 DraI CDO99 EcoRI CDO99 EcoRV
Linkage Group
1S,7S [b 5H]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
2.1
PCR size
2.1
GrainGenes Marker Report: Xcdo99
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