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GrainGenes Marker Report: Xcfd0152-3D

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Locus
Xcfd0152-3D
Type
Microsatellite
Map
P91193D1/P92201D5-3D108.5
[ Show Nearby Loci ]
Map Data
Wheat, P91193D1 x P92201D5
Probe
CFD152
Possible Orthologs
Xcfd152
Xcfd152-3D
cfd152-3D



Probe for Locus
CFD152
Locus
Xcfd152-3D
Xcfd152
Xcfd0152-3D
cfd152-3D
Reference
ReferenceGuyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks
Quality Score = B
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (TC)24
Regularity of motif is perfect
Type
PCR
SSR
PCR primers
Forward 5' TGGAAGTCTGGAACCACTCC 3'
Reverse 5' GCAACCAGACCACACTCTCA 3'
SSR size
288
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
3D
Source Species
Aegilops tauschii