GrainGenes Marker Report: Xcnl10(Lpx-B1)-4B
Locus
Xcnl10(Lpx-B1)-4B
Type
STS
Synonym
Other name Loxmjt 
Nachit MM et al. (2001) Molecular linkage map for an intraspecific recombinant inbred population of durum wheat (Triticum turgidum L. var. durum) Theoretical and Applied Genetics 102:177-186.
Xcnl27(Lpx-B1)-4B
Chromosome
4B
Chromosome Arm
4BS
Map
Tturgidum-JKxC-4B 16 Tturgidum-JKxC2-4B 169.9 Wheat_Yr_2021-4B 46.57
[ Show Nearby Loci ]
Map Data
T. turgidum, JK x Cham1 T. turgidum, JK x Cham1, 2 Wheat, Yr Update, 2021
Species
Triticum turgidum ssp. durum
Probe
CNL10 Hessler TG et al. (2002) Association of a lipoxygenase locus, Lpx-B1, with variation in lipoxygenase activity in durum wheat seeds Crop Science 42:1695-1700.
Associated Gene
Lpx-B1 (Triticum)
Gene Class
Lipoxygenase
Reference
Hessler TG et al. (2002) Association of a lipoxygenase locus, Lpx-B1, with variation in lipoxygenase activity in durum wheat seeds Crop Science 42:1695-1700.
Data Source
Sorrells, Mark E. 2005.11
Remark
In the Jennah Khetifa x Cham 1 population this locus accounted for 36% of the variation in lipoxygenase activity.
Probe for Locus
CNL10
Locus
Xcnl10(Lpx-B1)-4B
[ Show all 6 ]
Synonym
Other name CNL27
Similar Probes
BLYLOXA
Reference
Hessler TG et al. (2002) Association of a lipoxygenase locus, Lpx-B1, with variation in lipoxygenase activity in durum wheat seeds Crop Science 42:1695-1700.
General Remarks
The primers span a polymorphism in a 'Stowaway'-type MITE element.
Type
PCR STS
STS primers
Forward 5' - CTT ACC TAG TAC AAT GTA CTC TCT CT - 3'
Reverse 5' - ATG ATG GTC TGG ATC TGG - 3'
Amplification Conditions
95oC 5 min., 1 cycle; 95oC 1 min., 59oC 1 min., 72oC 2 min., 35 cycles; 72oC 8 min., 1 cycle
Linkage Group
4BS
Source Gene Class
Lipoxygenase
Source Species
Triticum turgidum ssp. durum
GrainGenes Marker Report: Xcnl10(Lpx-B1)-4B
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