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GrainGenes Marker Report: Xgwm107-4B

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Locus
Xgwm107-4B
Type
Microsatellite
Chromosome
4B
Chromosome Arm
4BL
Map
Chinese_Spring_Deletion_SSR_4B-0.185
[ Show all 8 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-4BS4-0.37
Map Data
T. turgidum, Omrabi5 x dicoccoides, QTL
[ Show all 8 ]
Probe
WMS107
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceSomers DJ et al. (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat Genome 46:555-564.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-4B, the intervals most likely to contain locus are Xbcd1262 - Xbcd1265 or distal to Xbcd1262
Possible Orthologs
gwm107
[ Show all 8 ]



Probe for Locus
WMS107
Locus
Xgwm107-6B
[ Show all 9 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CT)21
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' ATTAATACCTGAGGGAGGTGC 3'
5' GGTCTCAGGAGCAAGAACAC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS107
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring