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GrainGenes Marker Report: Xgwm181-3B

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Locus
Xgwm181-3B
Type
Microsatellite
Chromosome
3B
Chromosome Arm
3BL
Map
Chinese_Spring_Deletion_SSR_3B0.815
[ Show all 10 ]
[ Show Nearby Loci ]
Breakpoint Interval
3BL7-0.63-1.00
Map Data
Durum wheat, Kofa x UC1113
[ Show all 10 ]
Species
Triticum aestivum
Probe
WMS181
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-3B, the interval most likely to contain locus is between Xtam63 and Xmwg11
Possible Orthologs
gwm181
Xgwm181
gwm181-3B



Probe for Locus
WMS181
Locus
Xgwm181
Xgwm181-3B
gwm181
gwm181-3B
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)28
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' TCATTGGTAATGAGGAGAGA 3'
5' GAACCATTCATGTGCATGTC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 50 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS181
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring