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GrainGenes Marker Report: Xgwm3-2D

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Locus	Xgwm3-2D
Type	Microsatellite
Chromosome	2D
Chromosome Arm	2DL
Map	Triticum-WxM-FHB-QTL-2D 104
	[ Show Nearby Loci ]
Map Data	Wheat, WxM, FHB QTL
Probe	WMS3
Reference	Somers DJ et al. (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat Genome 46:555-564.
Possible Orthologs	Xgwm3 Xgwm3-3D Xgwm3b gwm3
Probe for Locus	WMS3
Locus	Xgwm3-3D [ Show all 7 ]
Reference	Fu YB et al. (2007) Microsatellite variation in Avena sterilis oat germplasm Theoretical and Applied Genetics 114:1029-1038. Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023. Roeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.
General Remarks	Insert contains repeat (CA)18 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER. Repeat type (CA)x18. Product size 84 bp in Cheyenne. In 369 Avena sterilis accessions there were 3 alleles of size 44-50 bp, PIC = negative.
Type	Genomic PCR SSR
PCR primers	5' GCAGCGGCACTGGTACATTT 3' 5' AATATCGCATCACTATCCCA 3'
Amplification Conditions	3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism	WMS3
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring