Query (optional)   in Class  

GrainGenes Marker Report: Xgwm319-2B

[Submit comment/correction]

Locus
Xgwm319-2B
Type
Microsatellite
Chromosome
2B
Chromosome Arm
2BS
Map
Chinese_Spring_Deletion_SSR_2B-0.265
[ Show all 7 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-2BS1-0.53
Map Data
T. turgidum, Omrabi5 x dicoccoides, QTL
[ Show all 7 ]
Probe
WMS319
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-2B, the intervals most likely to contain locus are XksuF11 - Xwg996 or Xwg996 - Xgwm55.1
Possible Orthologs
Xgwm319
Xgwm319-7A
gwm319
gwm319-2B



Probe for Locus
WMS319
Locus
Xgwm319-2B
[ Show all 6 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CT)11(N)23(CT)6
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' GGTTGCTGTACAAGTGTTCACG 3'
5' CGGGTGCTGTGTGTAATGAC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS319
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring