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GrainGenes Marker Report: Xgwm33-1A

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Locus
Xgwm33-1A
Type
Microsatellite
Chromosome
1A
Chromosome Arm
1AS
Map
Chinese_Spring_Deletion_SSR_1A-0.93
[ Show all 8 ]
[ Show Nearby Loci ]
Breakpoint Interval
1AS3-0.86-1.00
Map Data
T. boeoticum x monococcum
[ Show all 8 ]
Probe
WMS33
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
ReferenceRoeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.
Data Source
Roeder, Marion S.98.09.15
Possible Orthologs
Xgwm33
[ Show all 13 ]



Probe for Locus
WMS33
Locus
Xgwm33-1A
[ Show all 14 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
ReferenceRoeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.
General Remarks
Insert contains repeat (GA)19
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Repeat type (GA)x19.
Product size 123 bp in Chinese Spring.
Type
PCR
SSR
PCR primers
5' GGAGTCACACTTGTTTGTGCA 3'
5' CACTGCACACCTAACTACCTGC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS33
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring