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GrainGenes Marker Report: Xgwm349-2D

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Locus
Xgwm349-2D
Type
Microsatellite
Chromosome
2D
Chromosome Arm
2DL
Map
Chinese_Spring_Deletion_SSR_2D0.245
[ Show all 10 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QTwt.crc-2D
Breakpoint Interval
C-2DL3-0.49
Map Data
Wheat, Arina x Forno
[ Show all 10 ]
Species
Triticum aestivum
Probe
WMS349
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceSomers DJ et al. (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat Genome 46:555-564.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-2D, the intervals most likely to contain locus are Xcdo1008 - Xcdo36 or distal to Xcdo36
Possible Orthologs
Xgwm349a
Xgwm349b
Xgwm349
gwm349


Probe for Locus
WMS349
Locus
Xgwm349-2D
Xgwm349a
Xgwm349b
gwm349
Xgwm349
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)34
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' GGCTTCCAGAAAACAACAGG 3'
5' ATCGGTGCGTACCATCCTAC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS349
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring