GrainGenes Marker Report: Xgwm397-4A
Locus
Xgwm397-4A
Type
Microsatellite
Chromosome
4A
Chromosome Arm
4AL 4AS
Map
Chinese_Spring_Deletion_SSR_4A 0.625
[ Show all 13 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QLd.sfr-4A
Breakpoint Interval
4AL13-0.59-0.66
Map Data
T. boeoticum x monococcum
[ Show all 13 ]
Species
Triticum aestivum
Probe
WMS397
Reference
Data Source
Roeder, Marion S. 98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-4A, the interval most likely to contain locus is between Xwg622 and Xgwm637 Segregation significantly distorted in favor of the Oberkulmer alleles (P < 0.05)
Possible Orthologs
Xgwm397 Xgwm397a gwm397
Probe for Locus
WMS397
Locus
Xgwm397-4A Xgwm397 Xgwm397a Xgwm397b gwm397
Reference
Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CT)21 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR SSR
PCR primers
5' TGTCATGGATTATTTGGTCGG 3'
5' CTGCACTCTCGGTATACCAGC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS397
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Marker Report: Xgwm397-4A
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