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GrainGenes Marker Report: Xgwm455-2D

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Locus
Xgwm455-2D
Type
Microsatellite
Chromosome
2D
Chromosome Arm
2DS
Map
Chinese_Spring_Deletion_SSR_2D-0.735
[ Show all 8 ]
[ Show Nearby Loci ]
Breakpoint Interval
2DS5-0.47-1.00
Map Data
Wheat, Consensus SSR, 2004
[ Show all 9 ]
Probe
WMS455
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferenceSomers DJ et al. (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat Genome 46:555-564.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-2D, the intervals most likely to contain locus are Xbcd102 - Xgwm296 or Xgwm296 - Xgwm261
Possible Orthologs
Xgwm455
Xgwm455-6B
gwm455
gwm455-2D



Probe for Locus
WMS455
Locus
Xgwm455-2D
Xgwm455-6B
Xgwm455
gwm455
gwm455-2D
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GT)19imp
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' ATTCGGTTCGCTAGCTACCA 3'
5' ACGGAGAGCAACCTGCC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS455
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring