Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Xgwm484-2D

[Submit comment/correction]

Locus	Xgwm484-2D
Type	Microsatellite
Chromosome	2D
Chromosome Arm	2DS
Map	Chinese_Spring_Deletion_SSR_2D -0.165 [ Show all 8 ]
	[ Show Nearby Loci ]
Breakpoint Interval	C-2DS1-0.33
Map Data	Wheat, Arina x Forno [ Show all 8 ]
Species	Triticum aestivum
Probe	WMS484
Reference	Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114. Somers DJ et al. (2003) Molecular mapping of novel genes controlling Fusarium head blight resistance and deoxynivalenol accumulation in spring wheat Genome 46:555-564. Paillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242. Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source	Roeder, Marion S. 98.09.15
Remark	In Map Ta-Synthetic/Opata-SSR-2D, the interval most likely to contain locus is between Xcdo1379 and Xbcd262
Possible Orthologs	Xgwm484 gwm484
Probe for Locus	WMS484
Locus	Xgwm484-2D Xgwm484 gwm484
Reference	Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks	Insert contains repeat (CT)29 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type	PCR SSR
PCR primers	5' ACATCGCTCTTCACAAACCC 3' 5' AGTTCCGGTCATGGCTAGG 3'
Amplification Conditions	3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism	WMS484
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring