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GrainGenes Marker Report: Xgwm5

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Locus
Xgwm5
Type
Microsatellite
Chromosome
3A
Map
Wheat-Composite2004-3A72
[ Show Nearby Loci ]
Map Data
Wheat, Composite, 2004
Probe
WMS5
Possible Orthologs
Xgwm5-3A
[ Show all 16 ]



Probe for Locus
WMS5
Locus
Xgwm5-3A
[ Show all 16 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
ReferenceRoeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.
General Remarks
Insert contains repeat (TC)23(T)4(GT)12(GA)10
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Repeat type (TC)x23(T)x4(GT)x12(GA)x10.
Product size 172 bp in Chinese Spring.
Type
PCR
SSR
PCR primers
5' GCCAGCTACCTCGATACAACTC 3'
5' AGAAAGGGCCAGGCTAGTAGT 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 50 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS5
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring