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GrainGenes Marker Report: Xgwm577

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Locus
Xgwm577
Type
Microsatellite
Chromosome
7B
Map
Svevo/Ciccio-7B155.9
Ta-NxW-7B159.8
Wheat, Avalon x Cadenza 7B60.4
Wheat, WH542 x Synthetic 7B60
Wheat-Composite2004-7B105
[ Show Nearby Loci ]
Breakpoint Interval
7BL10-0.78-1.00
Map Data
Durum wheat, Svevo x Ciccio
Wheat, Avalon x Cadenza
Wheat, Composite, 2004
Wheat, Nanda2419 x Wangshuibai
Wheat, WH542 x Synthetic
Probe
WMS577
Possible Orthologs
Xgwm577-7B
[ Show all 9 ]



Probe for Locus
WMS577
Locus
Xgwm577-7B
[ Show all 12 ]
Reference
ReferenceFu YB et al. (2007) Microsatellite variation in Avena sterilis oat germplasm Theoretical and Applied Genetics 114:1029-1038.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CA)14(TA)6
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
In 369 Avena sterilis accessions there were 2 alleles of size 50-55 bp, PIC = negative.
Type
Genomic
PCR
SSR
PCR primers
5' ATGGCATAATTTGGTGAAATTG 3'
5' TGTTTCAAGCCCAACTTCTATT 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS577
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring