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GrainGenes Marker Report: Xgwm77-3B

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Locus
Xgwm77-3B
Type
Microsatellite
Chromosome
3B
Chromosome Arm
3BS
Map
Chinese_Spring_Deletion_SSR_3B-0.165
[ Show all 7 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-3BS1-0.33
Map Data
Wheat, Arina x Forno
[ Show all 7 ]
Species
Triticum aestivum
Probe
WMS77
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-3B, the intervals most likely to contain locus are Xcdo328 - Xpsr903 or Xpsr903 - XATPase.2
Possible Orthologs
gwm77
Xgwm77
gwm77-3B



Probe for Locus
WMS77
Locus
Xgwm77
Xgwm77-3B
gwm77
gwm77-3B
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CA)10(GA)40imp
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' ACAAAGGTAAGCAGCACCTG 3'
5' ACCCTCTTGCCCGTGTTG 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS77
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring