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GrainGenes Marker Report: Xmwg916-6R

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Locus	Xmwg916-6R
Type	RFLP
Chromosome	6R
Map	Secale-N6xN2-2004-6R 21.5 Secale-N7xN6-2004-6R 6.2
	[ Show Nearby Loci ]
Map Data	Rye, N6 x N2, 2004 Rye, N7 x N6, 2004
Species	Secale cereale
Probe	MWG916
Reference	Khlestkina EK et al. (2004) Mapping of 99 new microsatellite-derived loci in rye (Secale cereale L.) including 39 expressed sequence tags Theoretical and Applied Genetics 109:725-732.
Possible Orthologs	MWG916 [ Show all 6 ]
Probe for Locus	MWG916
Locus	MWG916 [ Show all 7 ]
Synonym	Synonym HAR35_35585
Reference	Abu Qamar M et al. (2008) A region of barley chromosome 6H harbors multiple major genes associated with net type net blotch resistance. Theoretical and Applied Genetics 117:1261-1270. Kunzel G et al. (2000) Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints Genetics 154:397-412.
General Remarks	Restriction enzyme informative in CAP analysis is HaeIII
Type	Genomic STS
STS primers	5' GCGGACCAGATCAATATCGA 5' CGACGTAGGGAAACACGCAT
STS size	196
Amplification Conditions	STS annealing temperature 55-58 oC
Sequence	AJ234646 AJ234645 MWG916-5 MWG916-3
Insert Enzyme	PstI
Source Species	Hordeum vulgare