GrainGenes Marker Report: Xpsr116
Locus
Xpsr116
Type
RFLP
Chromosome
3D 3R
Chromosome Arm
3DL 3RL
Map
Rye-2009-Consensus-3R 79.5 Secale-Devos-3R 0 Secale-DxR-RAPD-3R 62.9 Ta-Physical-Gill-3ABD 25
[ Show Nearby Loci ]
Breakpoint Interval
3L-0.22-0.28
Map Data
Rye, Ds2 x RxL10 Rye, Ds2 x RxL10, RAPD Rye_2009_consensus Wheat, Physical
Species
Triticum aestivum
Probe
PSR116
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Data Source
Gale, Michael D. 93.03
Possible Orthologs
PSR116 Xpsr116(Pp) Xpsr116-3A Xpsr116-3B Xpsr116-3D
Probe for Locus
PSR116
Locus
Xpsr116-3A
[ Show all 6 ]
Synonym
Synonym HAR35_259 HAR35_28810
General Remarks
Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type
cDNA
Sequence
PSR116 Forward PSR116 Reverse
Copy Number
1
Background
0
Cross hybridizes to
Secale cereale good Hordeum vulgare good
Polymorphism
PSR116 H EcoRI 15.4 (2, 13)
[ Show all 21 ]
Gel
PSR116 Gale
Linkage Group
3AL 3BL 3DL 3H 3RL
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Source Tissue
Leaf
Insert Size
1.3
GrainGenes Marker Report: Xpsr116
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