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GrainGenes Marker Report: Xwmc007

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Locus
Xwmc007
Type
Microsatellite
Synonym
Other nameXAWM007
Chromosome
3B
Map
Wheat-Composite2004-3B31
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Map Data
Wheat, Composite, 2004
Probe
WMC7
Possible Orthologs
wmc7



Probe for Locus
WMC7
Locus
wmc7
Xwmc007
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 1E3
Donor: Nickerson
AGR21. Trimmed to Rsa1 fragment. Multple inserts (2). Complex (C)(CA)(GA) repeat in second fragment. Last insert highly homologous to 1B5. Bases 1 to 32 show homology to 19a6 bases 133 to 164 (32 in longest run, maxScore = 27).
Type
PCR
SSR
PCR primers
Forward gcTTggAcTAgcTAgAgTATcAT at 356 length 23 bases, Tm 56
Reverse AcAATcTTcAATTcTgTcgcAcg at 536 length 23 bases, Tm 65
SSR size
203 bases expected, Chinese Spring
Amplification Conditions
51C anneal, product;
Sequence
WMC7
Source Species
Triticum aestivum