Query (optional)   in Class  

GrainGenes Marker Report: Xwmc16-4B

[Submit comment/correction]

Locus
Xwmc16-4B
Type
Microsatellite
Chromosome
4B
Map
Ta-SSR-2004-4B24.5
[ Show Nearby Loci ]
Map Data
Wheat, Consensus SSR, 2004
Probe
WMC16
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs
wmc16
wmc16-2B
wmc16-4B



Probe for Locus
WMC16
Locus
Xwmc16-4B
wmc16
wmc16-2B
wmc16-4B
Reference
ReferenceSomers DJ and Isaac P (2004) SSRs from the Wheat Microsatellite Consortium.
General Remarks
Wheat Microsatellite Consortium Project 1, Plate reference 1A6
Donor: Nickerson
Location from nullisomic/tetrasomic (Daryl Somers, AgCanada, Feb 2001) : 165 bases located on 4B
AGR41. CT microsatellite. Expected fragment size 109. Small smeary products obtained on agarose after PCR 61C anneal.
Type
PCR
SSR
PCR primers
Forward AccgccTgcATTcTcATcTAcA at 26 length 22 bases, Tm 66
Reverse gTggcgccATggTAgAgATTTg at 113 length 22 bases, Tm 68
SSR size
109 bases expected, Chinese Spring
Amplification Conditions
61C anneal, smear;
Sequence
WMC16
Source Species
Triticum aestivum